Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | no data | N/A | N/A |
| Ring | no data | 0.20 | 0.90 |
| Trophozoite | no data | 0.25 | 0.84 |
| Schizont | no data | 0.09 | 0.94 |
| Gametocyte | no data | 0.22 | 0.87 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1450200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.204 | MFS: -3.912 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6S3J2
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 1 | 5 | 2 | 8 |
| disruptive | 3 | 9 | 8 | 21 |
| missense | 3 | 9 | 8 | 16 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 2 | 8 | 6 | 12 |
| disruptive | 7 | 23 | 14 | 47 |
| missense | 7 | 18 | 12 | 31 |
PlasmoDB Total SNPs: 76
Non-coding: 71 | Synonymous: 2 | Nonsynonymous: 3 | Stop Codon: 0
Protein Length: 126 | Molecular Weight (kDa): 14.922
UniProt ID(s): C6S3J2
PDB ID(s): None
Isoelectric Point: 9.75
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |