Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.51 | 0.77 |
Trophozoite | expressed | 1.07 | 0.48 |
Schizont | expressed | 1.46 | 0.36 |
Gametocyte | possibly expressed | 1.18 | 0.43 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1452600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.14 | MFS: -2.896 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1316300)
Modification: Disrupted | RMgm-3485
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 33 | 200 | 129 | 260 |
disruptive | 100 | 554 | 298 | 715 |
missense | 79 | 503 | 276 | 627 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 61 | 408 | 182 | 264 |
disruptive | 227 | 1202 | 501 | 1051 |
missense | 159 | 1033 | 423 | 766 |
PlasmoDB Total SNPs: 410
Non-coding: 105 | Synonymous: 189 | Nonsynonymous: 116 | Stop Codon: 0
Protein Length: 3347 | Molecular Weight (kDa): 399.999
UniProt ID(s): Q8IKV0
PDB ID(s): None
Isoelectric Point: 6.65
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR010301 | Nucleolar, Nop52 |
InterPro | IPR032629 | Mon2, dimerisation and cyclophilin-binding domain |
PFam | PF16213 | Mon2, dimerisation and cyclophilin-binding domain |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |