Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | not expressed | 0.04 | 0.97 |
Schizont | not expressed | 0.02 | 0.98 |
Gametocyte | not expressed | 0.33 | 0.82 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1452800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.999 | MFS: -2.825 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKU8
"Best" AlphaFill ligand hit: AN2 (amp phosphoramidate, Local RMSD=1.83) with 3IED (Global RMSD=45.37)
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_116079
Most Similar Human Ortholog: Q9BXX0
TM-align score: 0.45 | RMSD: 3.82
Seq Identity: 0.06 | Length: 145 / 256
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000132205 | elastin microfibril interfacer 2 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 0 | 15 | 13 | 22 |
disruptive | 8 | 39 | 31 | 55 |
missense | 8 | 39 | 31 | 53 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 29 | 18 | 19 |
disruptive | 15 | 86 | 38 | 68 |
missense | 15 | 74 | 35 | 65 |
PlasmoDB Total SNPs: 112
Non-coding: 89 | Synonymous: 16 | Nonsynonymous: 7 | Stop Codon: 0
Protein Length: 256 | Molecular Weight (kDa): 30.838
UniProt ID(s): Q8IKU8
PDB ID(s): None
Isoelectric Point: 5.38
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |