Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | expressed | N/A | N/A |
| Ring | expressed | 0.00 | 1.00 |
| Trophozoite | expressed | 0.00 | 1.00 |
| Schizont | expressed | 0.00 | 1.00 |
| Gametocyte | expressed | 0.67 | 0.70 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1454900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.647 | MFS: -2.439 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PY17X_1322400)
Modification: Disrupted | RMgm-5288
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKT0
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 0 | 7 | 8 | 11 |
| disruptive | 2 | 6 | 3 | 10 |
| missense | 2 | 6 | 2 | 8 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 3 | 18 | 10 | 17 |
| disruptive | 2 | 17 | 6 | 32 |
| missense | 2 | 13 | 5 | 23 |
PlasmoDB Total SNPs: 31
Non-coding: 26 | Synonymous: 1 | Nonsynonymous: 4 | Stop Codon: 0
Protein Length: 154 | Molecular Weight (kDa): 17.377
UniProt ID(s): Q8IKT0
PDB ID(s): None
Isoelectric Point: 6.2
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |