Genome location: Pf3D7_14_v3:2,246,812..2,250,659(-)
Genome classification: Core
Product Description: protein phosphatase PPM3, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: 3.1.3.16 (Protein-serine/threonine phosphatase)
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005737 | cytoplasm |
Component | GO:0005634 | nucleus |
Component | GO:0020003 | symbiont-containing vacuole |
Function | GO:0004724 | magnesium-dependent protein serine/threonine phosphatase activity |
Function | GO:0004722 | protein serine/threonine phosphatase activity |
Process | GO:0006470 | protein dephosphorylation |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | possibly expressed | 0.02 | 0.99 |
Schizont | possibly expressed | 0.05 | 0.97 |
Gametocyte | expressed | 0.58 | 0.68 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1455000
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.574 | MFS: -3.109 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1318700)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1318700)
Modification: Disrupted | RMgm-3495
More info: PhenoPlasm Link
Protein Length: 410 | Molecular Weight (kDa): 47.477
UniProt ID(s): Q8IKS9
PDB ID(s): None
Isoelectric Point: 7.69
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR001932 | PPM-type phosphatase domain |
InterPro | IPR015655 | Protein phosphatase 2C family |
InterPro | IPR036457 | PPM-type phosphatase domain superfamily |
PFam | PF00481 | PPM-type phosphatase domain |
Superfamily | SSF81606 | PPM-type phosphatase domain superfamily |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 18 | 19 | 32 |
disruptive | 0 | 0 | 4 | 16 |
missense | 0 | 0 | 4 | 15 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 48 | 21 | 29 |
disruptive | 0 | 16 | 32 | 72 |
missense | 0 | 10 | 25 | 52 |
PlasmoDB Total SNPs: 172
Non-coding: 157 | Synonymous: 15 | Nonsynonymous: 0 | Stop Codon: 0
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
25011111 | Genome-wide functional analysis of Plasmodium protein phosphatases reveals keyregulators of parasite development and differentiation. | Guttery DS, Poulin B, ..., Tewari R | 10.1016/j.chom.2014.05.020 |
33370417 | Toxoplasma gondii PPM3C, a secreted protein phosphatase, affects parasitophorousvacuole effector export. | Mayoral J, Tomita T, ..., Weiss LM | 10.1371/journal.ppat.1008771 |