Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 0.99 |
Trophozoite | not expressed | 0.04 | 0.98 |
Schizont | not expressed | 0.02 | 0.98 |
Gametocyte | expressed | 0.59 | 0.72 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1456400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 0.311 | #Insertions: 6
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1320100)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1320100)
Modification: Disrupted | RMgm-3504
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKR5
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 36 | 31 | 65 |
disruptive | 48 | 222 | 84 | 215 |
missense | 39 | 185 | 73 | 182 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 17 | 82 | 58 | 76 |
disruptive | 116 | 391 | 164 | 325 |
missense | 80 | 315 | 127 | 207 |
PlasmoDB Total SNPs: 176
Non-coding: 32 | Synonymous: 98 | Nonsynonymous: 46 | Stop Codon: 0
Protein Length: 1015 | Molecular Weight (kDa): 121.886
UniProt ID(s): Q8IKR5
PDB ID(s): None
Isoelectric Point: 9.71
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |