Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | expressed | 0.10 | 0.95 |
Trophozoite | expressed | 0.19 | 0.88 |
Schizont | expressed | 0.16 | 0.89 |
Gametocyte | expressed | 0.71 | 0.66 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1457100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.534 | #Insertions: 4
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKQ8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 13 | 39 | 20 | 42 |
disruptive | 27 | 163 | 94 | 197 |
missense | 26 | 160 | 94 | 184 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 23 | 60 | 30 | 55 |
disruptive | 54 | 320 | 130 | 284 |
missense | 51 | 303 | 117 | 193 |
PlasmoDB Total SNPs: 193
Non-coding: 105 | Synonymous: 50 | Nonsynonymous: 38 | Stop Codon: 0
Protein Length: 747 | Molecular Weight (kDa): 88.798
UniProt ID(s): Q8IKQ8
PDB ID(s): None
Isoelectric Point: 6.97
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |