Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.38 | 0.82 |
Trophozoite | not expressed | 0.69 | 0.62 |
Schizont | not expressed | 0.42 | 0.73 |
Gametocyte | not expressed | 0.52 | 0.71 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1457600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.217 | MFS: -2.778 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1321300)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKQ4
"Best" AlphaFill ligand hit: U2F (uridine-5'-diphosphate-2-deoxy-2-fluoro-alpha-d-glucose, Local RMSD=18.20) with 7MSK (Global RMSD=21.63)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 37 | 18 | 46 |
disruptive | 22 | 80 | 62 | 136 |
missense | 20 | 79 | 59 | 119 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 74 | 24 | 56 |
disruptive | 41 | 229 | 102 | 232 |
missense | 31 | 195 | 91 | 159 |
PlasmoDB Total SNPs: 67
Non-coding: 20 | Synonymous: 24 | Nonsynonymous: 23 | Stop Codon: 0
Protein Length: 553 | Molecular Weight (kDa): 66.309
UniProt ID(s): Q8IKQ4
PDB ID(s): None
Isoelectric Point: 9.69
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |