Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | not expressed | 0.12 | 0.92 |
Schizont | not expressed | 0.10 | 0.93 |
Gametocyte | expressed | 0.37 | 0.78 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1457800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.717 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKQ2
"Best" AlphaFill ligand hit: ATP (adenosine-5'-triphosphate, Local RMSD=4.74) with 7K3Z (Global RMSD=47.79)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 36 | 17 | 34 |
disruptive | 40 | 136 | 65 | 143 |
missense | 28 | 112 | 59 | 118 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 56 | 30 | 43 |
disruptive | 72 | 270 | 89 | 194 |
missense | 47 | 217 | 68 | 128 |
PlasmoDB Total SNPs: 126
Non-coding: 44 | Synonymous: 50 | Nonsynonymous: 31 | Stop Codon: 1
Protein Length: 503 | Molecular Weight (kDa): 60.108
UniProt ID(s): Q8IKQ2
PDB ID(s): None
Isoelectric Point: 4.43
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |