Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MNVLKLVLLFPLIMLLTHNIKIQS
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | no data | N/A | N/A |
| Ring | no data | 0.02 | 0.99 |
| Trophozoite | no data | 0.04 | 0.97 |
| Schizont | no data | 0.03 | 0.98 |
| Gametocyte | no data | 1.56 | 0.37 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1461700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.141 | MFS: -2.983 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6S3J8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 2 | 9 | 3 | 8 |
| disruptive | 0 | 14 | 6 | 13 |
| missense | 0 | 14 | 5 | 11 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 4 | 10 | 10 | 7 |
| disruptive | 1 | 35 | 16 | 27 |
| missense | 1 | 29 | 13 | 19 |
PlasmoDB Total SNPs: 145
Non-coding: 132 | Synonymous: 7 | Nonsynonymous: 5 | Stop Codon: 1
Protein Length: 126 | Molecular Weight (kDa): 15.262
UniProt ID(s): C6S3J8
PDB ID(s): None
Isoelectric Point: 11.27
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |