Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 2.04 | 0.28 |
Trophozoite | not expressed | 0.74 | 0.62 |
Schizont | not expressed | 0.35 | 0.82 |
Gametocyte | not expressed | 0.80 | 0.59 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1462400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 9 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.226 | #Insertions: 21
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 36 | 174 | 107 | 198 |
disruptive | 144 | 712 | 328 | 760 |
missense | 118 | 613 | 280 | 640 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 61 | 354 | 137 | 225 |
disruptive | 276 | 1343 | 539 | 1025 |
missense | 212 | 1096 | 450 | 723 |
PlasmoDB Total SNPs: 687
Non-coding: 283 | Synonymous: 219 | Nonsynonymous: 185 | Stop Codon: 0
Protein Length: 3322 | Molecular Weight (kDa): 395.678
UniProt ID(s): Q8IKL0
PDB ID(s): None
Isoelectric Point: 6.52
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |