Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 2.04 | 0.28 |
| Trophozoite | not expressed | 0.74 | 0.62 |
| Schizont | not expressed | 0.35 | 0.82 |
| Gametocyte | not expressed | 0.80 | 0.59 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1462400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 9 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.226 | #Insertions: 21
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 36 | 174 | 107 | 198 |
| disruptive | 144 | 712 | 328 | 760 |
| missense | 118 | 613 | 280 | 640 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 61 | 354 | 137 | 225 |
| disruptive | 276 | 1343 | 539 | 1025 |
| missense | 212 | 1096 | 450 | 723 |
PlasmoDB Total SNPs: 687
Non-coding: 283 | Synonymous: 219 | Nonsynonymous: 185 | Stop Codon: 0
Protein Length: 3322 | Molecular Weight (kDa): 395.678
UniProt ID(s): Q8IKL0
PDB ID(s): None
Isoelectric Point: 6.52
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
| 16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |