About Gene List

PF3D7_1462500

Genome location: Pf3D7_14_v3:2,544,824..2,549,785(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005930 axoneme
Function GO:0008017 microtubule binding
Process GO:0051493 regulation of cytoskeleton organization

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.01 0.99
Trophozoite not expressed 0.02 0.99
Schizont not expressed 0.01 0.99
Gametocyte not expressed 0.43 0.79

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1462500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 2 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.957 | MFS: -2.519 | #Insertions: 1

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1326100)

  • Relative Growth Rate: 1.03 ± 0.15
  • Confidence: 5.25

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1326100)

Modification: Disrupted | RMgm-3526

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IKK9

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_105954

Most Similar Human Ortholog: Q8NEY3

TM-align score: 0.42 | RMSD: 5.42

Seq Identity: 0.20 | Length: 193 / 762

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000150628 spermatogenesis associated 4

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 6 49 24 57
disruptive 11 93 53 120
missense 9 89 52 114

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 11 87 33 57
disruptive 23 189 93 172
missense 21 170 89 124

PlasmoDB Total SNPs: 291

Non-coding: 254 | Synonymous: 19 | Nonsynonymous: 18 | Stop Codon: 0

Protein Information

Protein Length: 762 | Molecular Weight (kDa): 91.86

UniProt ID(s): Q8IKK9

PDB ID(s): None

Isoelectric Point: 7.5

Protein Domain Annotations:

Source Family ID Description
InterPro IPR010441 CH-like domain in sperm protein
PFam PF06294 CH-like domain in sperm protein
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097