Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005930 | axoneme |
Function | GO:0008017 | microtubule binding |
Process | GO:0051493 | regulation of cytoskeleton organization |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 0.99 |
Trophozoite | not expressed | 0.02 | 0.99 |
Schizont | not expressed | 0.01 | 0.99 |
Gametocyte | not expressed | 0.43 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1462500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 2 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.957 | MFS: -2.519 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1326100)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1326100)
Modification: Disrupted | RMgm-3526
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKK9
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_105954
Most Similar Human Ortholog: Q8NEY3
TM-align score: 0.42 | RMSD: 5.42
Seq Identity: 0.20 | Length: 193 / 762
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000150628 | spermatogenesis associated 4 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 49 | 24 | 57 |
disruptive | 11 | 93 | 53 | 120 |
missense | 9 | 89 | 52 | 114 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 87 | 33 | 57 |
disruptive | 23 | 189 | 93 | 172 |
missense | 21 | 170 | 89 | 124 |
PlasmoDB Total SNPs: 291
Non-coding: 254 | Synonymous: 19 | Nonsynonymous: 18 | Stop Codon: 0
Protein Length: 762 | Molecular Weight (kDa): 91.86
UniProt ID(s): Q8IKK9
PDB ID(s): None
Isoelectric Point: 7.5
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR010441 | CH-like domain in sperm protein |
PFam | PF06294 | CH-like domain in sperm protein |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |