About Gene List

PF3D7_1462900

Genome location: Pf3D7_14_v3:2,560,998..2,563,920(-)

Genome classification: Core

Function and Localization

Product Description: AAA ATPase, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.19 0.91
Trophozoite not expressed 0.25 0.84
Schizont not expressed 0.04 0.98
Gametocyte not expressed 0.22 0.87

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1462900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.121 | MFS: -3.001 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IKK6

"Best" AlphaFill ligand hit: POP (pyrophosphate 2-, Local RMSD=0.43) with 2QOR (Global RMSD=19.84)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533636

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 17 43 33 51
disruptive 38 175 112 194
missense 27 165 103 176

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 23 82 46 47
disruptive 72 363 120 241
missense 51 326 103 184

PlasmoDB Total SNPs: 109

Non-coding: 29 | Synonymous: 39 | Nonsynonymous: 41 | Stop Codon: 0

Protein Information

Protein Length: 807 | Molecular Weight (kDa): 97.669

UniProt ID(s): Q8IKK6

PDB ID(s): None

Isoelectric Point: 10.04

Protein Domain Annotations:

Source Family ID Description
InterPro IPR003959 ATPase, AAA-type, core
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
PFam PF00004 ATPase, AAA-type, core
Superfamily SSF52540 P-loop containing nucleoside triphosphate hydrolase

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097