Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | not expressed | 0.02 | 0.99 |
Schizont | not expressed | 0.02 | 0.99 |
Gametocyte | not expressed | 0.32 | 0.82 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1465600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.327 | MFS: -2.506 | #Insertions: 0
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1329000)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1329000)
Modification: Disrupted | RMgm-3543
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKI1
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 25 | 17 | 33 |
disruptive | 16 | 49 | 31 | 67 |
missense | 15 | 47 | 31 | 62 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 48 | 29 | 37 |
disruptive | 23 | 97 | 49 | 101 |
missense | 22 | 88 | 40 | 78 |
PlasmoDB Total SNPs: 143
Non-coding: 120 | Synonymous: 10 | Nonsynonymous: 13 | Stop Codon: 0
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |