PF3D7_1465800

Genome location: Pf3D7_14_v3:2,662,020..2,682,705(+)

Genome classification: Core

Function and Localization

Product Description: dynein beta chain, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type	GO Term	Name
Component	GO:0030286	dynein complex
Function	GO:0045505	dynein intermediate chain binding
Function	GO:0051959	dynein light intermediate chain binding
Function	GO:0008569	minus-end-directed microtubule motor activity
Process	GO:0007018	microtubule-based movement

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage	LR class	MCA mean	MCA prop. zeros
Sporozoite	not expressed	N/A	N/A
Ring	not expressed	0.09	0.96
Trophozoite	not expressed	0.28	0.84
Schizont	not expressed	0.11	0.94
Gametocyte	not expressed	0.90	0.61

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1465800

Resistome Missense Mutations: I3819R

Resistome Compounds with Missense Mutations: BCH070

Resistome # Samples with Disruptive Mutations: 1 (1 missense, 1 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -1.429 | #Insertions: 22

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0925400)

Relative Growth Rate: 0.16 ± 0.46
Confidence: 2.96

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: N/A

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_100025

Most Similar Human Ortholog: Not available

TM-align score: 0.00 | RMSD: 0.00

Seq Identity: 0.00 | Length: / 6485

All Human Orthologs (OrthoMCL):

Gene ID	Description
ENSG00000007174	dynein axonemal heavy chain 9
ENSG00000039139	dynein axonemal heavy chain 5
ENSG00000105877	dynein axonemal heavy chain 11
ENSG00000114841	dynein axonemal heavy chain 1
ENSG00000115423	dynein axonemal heavy chain 6
ENSG00000118997	dynein axonemal heavy chain 7
ENSG00000124721	dynein axonemal heavy chain 8
ENSG00000158486	dynein axonemal heavy chain 3
ENSG00000174844	dynein axonemal heavy chain 12
ENSG00000183914	dynein axonemal heavy chain 2
ENSG00000185842	dynein axonemal heavy chain 14
ENSG00000187240	dynein cytoplasmic 2 heavy chain 1
ENSG00000187775	dynein axonemal heavy chain 17
ENSG00000197102	dynein cytoplasmic 1 heavy chain 1
ENSG00000197653	dynein axonemal heavy chain 10
ENSG00000281935	dynein axonemal heavy chain 10

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type	common	rare	doubleton	singleton
synonymous	52	340	183	436
disruptive	139	629	409	1083
missense	113	573	384	984

Any inclusion in genotype call

variant type	common	rare	doubleton	singleton
synonymous	97	625	285	459
disruptive	268	1325	680	1309
missense	207	1151	626	1078

PlasmoDB Total SNPs: 518

Non-coding: 78 | Synonymous: 260 | Nonsynonymous: 179 | Stop Codon: 1

Protein Information

Protein Length: 6485 | Molecular Weight (kDa): 773.112

UniProt ID(s): Q8IKH9

PDB ID(s): None

Isoelectric Point: 7.01

Protein Domain Annotations:

Source	Family ID	Description
InterPro	IPR004273	Dynein heavy chain region D6 P-loop domain
InterPro	IPR016024	Armadillo-type fold
InterPro	IPR026983	Dynein heavy chain
InterPro	IPR027417	P-loop containing nucleoside triphosphate hydrolase
InterPro	IPR035699	Dynein heavy chain, hydrolytic ATP-binding dynein motor region
InterPro	IPR041228	Dynein heavy chain, C-terminal domain
InterPro	IPR041466	Dynein heavy chain, AAA 5 extension domain
InterPro	IPR041589	Dynein heavy chain 3, AAA+ lid domain
InterPro	IPR041658	Dynein heavy chain AAA lid domain
PFam	PF03028	Dynein heavy chain region D6 P-loop domain
PFam	PF12774	Dynein heavy chain, hydrolytic ATP-binding dynein motor region
PFam	PF12775	Dynein heavy chain, AAA 5 extension domain
PFam	PF17852	Dynein heavy chain 3, AAA+ lid domain
PFam	PF17857	Dynein heavy chain AAA lid domain
PFam	PF18198	Dynein heavy chain, C-terminal domain
PFam	PF18199
Superfamily	SSF48371	Armadillo-type fold
Superfamily	SSF52540	P-loop containing nucleoside triphosphate hydrolase