Product Description: conserved protein, unknown function
SignalP Peptide: MKTYINLFFLLSLLKVTFIYS
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.00 | 1.00 |
Trophozoite | not expressed | 0.00 | 1.00 |
Schizont | not expressed | 0.01 | 1.00 |
Gametocyte | expressed | 0.23 | 0.87 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1466000
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.98 | MFS: -2.48 | #Insertions: 0
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1329400)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1329400)
Modification: Disrupted | RMgm-3545
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKH6
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 26 | 14 | 18 |
disruptive | 2 | 26 | 17 | 39 |
missense | 2 | 26 | 17 | 36 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 13 | 37 | 16 | 22 |
disruptive | 6 | 63 | 24 | 64 |
missense | 4 | 58 | 23 | 50 |
PlasmoDB Total SNPs: 90
Non-coding: 72 | Synonymous: 13 | Nonsynonymous: 4 | Stop Codon: 1
Protein Length: 313 | Molecular Weight (kDa): 36.535
UniProt ID(s): Q8IKH6
PDB ID(s): None
Isoelectric Point: 8.06
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |