Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 0.02 | 0.99 |
Trophozoite | expressed | 0.16 | 0.90 |
Schizont | expressed | 0.01 | 1.00 |
Gametocyte | expressed | 0.02 | 0.99 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1473600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.124 | MFS: -2.739 | #Insertions: 0
PlasmoGEM Phenotype: Insufficient data (Pb ortholog: PBANKA_1336800)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKA1
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 8 | 1 | 8 |
disruptive | 0 | 3 | 1 | 8 |
missense | 0 | 3 | 1 | 8 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 10 | 6 | 9 |
disruptive | 0 | 11 | 15 | 42 |
missense | 0 | 10 | 13 | 26 |
PlasmoDB Total SNPs: 100
Non-coding: 97 | Synonymous: 2 | Nonsynonymous: 1 | Stop Codon: 0
Protein Length: 114 | Molecular Weight (kDa): 12.565
UniProt ID(s): Q8IKA1
PDB ID(s): None
Isoelectric Point: 5.15
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |