Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 0.00 | 1.00 |
Trophozoite | possibly expressed | 0.01 | 1.00 |
Schizont | expressed | 0.12 | 0.93 |
Gametocyte | possibly expressed | 0.01 | 0.99 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1475800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.976 | MFS: -2.732 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A144A7A0
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 6 | 5 | 11 |
disruptive | 106 | 36 | 10 | 28 |
missense | 91 | 31 | 10 | 23 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 13 | 7 | 10 |
disruptive | 121 | 46 | 19 | 39 |
missense | 102 | 40 | 16 | 28 |
PlasmoDB Total SNPs: 99
Non-coding: 2 | Synonymous: 12 | Nonsynonymous: 85 | Stop Codon: 0
Protein Length: 309 | Molecular Weight (kDa): 34.14
UniProt ID(s): A0A144A7A0, A0A650D6D5, A0A650D6E5, A0A650D6E7, A0A650D6F0, A0A650D6F5, A0A650D6F8, A0A650D6G2, A0A650D6G5, A0A650D6H1, A0A650D6H2, A0A650D6H7, A0A650D6H8, A0A650D6I4, A0A650D6J0, A0A650D6J4, A0A650D6K5, A0A650D6P3, A0A650D6R1
PDB ID(s): None
Isoelectric Point: 4.23
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
12368868 | Sequence of Plasmodium falciparum chromosomes 2, 10, 11 and 14. | Gardner MJ, Shallom SJ, ..., Fraser CM | 10.1038/nature01094 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |