Genome location: Pf3D7_14_v3:3,201,236..3,204,592(+)
Genome classification: Core
Product Description: Plasmodium exported protein (PHISTa), unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020003 | symbiont-containing vacuole |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | possibly expressed | 0.04 | 0.98 |
Trophozoite | expressed | 0.05 | 0.98 |
Schizont | expressed | 0.02 | 0.99 |
Gametocyte | expressed | 1.09 | 0.55 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1477700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.12 | MFS: -3.172 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IK58
"Best" AlphaFill ligand hit: ADP (adenosine-5'-diphosphate, Local RMSD=7.33) with 6MT9 (Global RMSD=21.14)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 12 | 7 | 20 |
disruptive | 13 | 24 | 15 | 41 |
missense | 11 | 23 | 14 | 40 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 19 | 18 | 23 |
disruptive | 18 | 58 | 23 | 67 |
missense | 13 | 54 | 20 | 54 |
PlasmoDB Total SNPs: 209
Non-coding: 184 | Synonymous: 9 | Nonsynonymous: 15 | Stop Codon: 1
Protein Length: 291 | Molecular Weight (kDa): 34.478
UniProt ID(s): Q8IK58
PDB ID(s): None
Isoelectric Point: 6.77
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR006526 | Exported protein, PHISTa/b/c, conserved domain, Plasmodium |
InterPro | IPR019111 | Plasmodium RESA, N-terminal |
PFam | PF09687 | Plasmodium RESA, N-terminal |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
15996767 | Identification of a subtelomeric gene family expressed during the asexual-sexualstage transition in Plasmodium falciparum. | Eksi S, Haile Y, ..., Williamson KC | 10.1016/j.molbiopara.2005.05.010 |