Product Description: apicoplast ribosomal protein S4
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | no data | N/A | N/A |
| Ring | no data | nd | nd |
| Trophozoite | no data | nd | nd |
| Schizont | no data | nd | nd |
| Gametocyte | no data | nd | nd |
More info:
Old (Pf3D7v3) Gene ID: PFC10_API0055
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: N/A
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A140KXU9
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
No passing variants found
PlasmoDB Total SNPs: 9
Non-coding: 1 | Synonymous: 6 | Nonsynonymous: 2 | Stop Codon: 0
Protein Length: 208 | Molecular Weight (kDa): 26.156
UniProt ID(s): A0A140KXU9
PDB ID(s): None
Isoelectric Point: 10.16
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR002942 | RNA-binding S4 domain |
| PFam | PF01479 | RNA-binding S4 domain |
| Superfamily | SSF55174 | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 27458998 | Transcripts in the Plasmodium Apicoplast Undergo Cleavage at tRNAs and Editing,and Include Antisense Sequences. | Nisbet RER, Kurniawan DP, Bowers HD, Howe CJ | 10.1016/j.protis.2016.06.003 |
| 8757284 | Complete gene map of the plastid-like DNA of the malaria parasite Plasmodiumfalciparum. | Wilson RJ, Denny PW, ..., Williamson DH | 10.1006/jmbi.1996.0449 |
| 37751644 | Screening of genes encoding proteins that interact with Nrf2: Probing a cDNAlibrary from Mytilus coruscus using a yeast two-hybrid system | Zhu L, Li Y, ..., Qi P | 10.1016/j.fsi.2023.109112 |