PF3D7_API01800 (RPL16)

Genome location: Pf3D7_API_v3:4,178..4,567(+)

Genome classification: Apicoplast

Function and Localization

Product Description: apicoplast ribosomal protein L16

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

More info:

• Malaria Parasite Metabolic Pathways (MPMP) Link
• BiGG Metabolic Model Link
• STRING Interaction Network Link

Resistome Mutations

Old (Pf3D7v3) Gene ID: PFC10_API0038

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: N/A

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1037700)

• Relative Growth Rate: 0.04 ± 0.07
• Confidence: 6.78

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q25810

"Best" AlphaFill ligand hit: No AlphaFill hits

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_101573

Most Similar Human Ortholog: E9PI14

TM-align score: 0.88 | RMSD: 1.06

Seq Identity: 0.28 | Length: 83 / 129

All Human Orthologs (OrthoMCL):

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

No passing variants found

PlasmoDB Total SNPs: 9

Non-coding: 0 | Synonymous: 8 | Nonsynonymous: 1 | Stop Codon: 0

Protein Information

Protein Length: 129 | Molecular Weight (kDa): 14.96

UniProt ID(s): Q25810

PDB ID(s): None

Isoelectric Point: 10.98

Protein Domain Annotations: